The following are services, sorted by Service Provider, have been identified as "dead" by the MOBY Service Testing agent.
A "dead" service is one that does not respond correctly to a MOBY "ping"; where a correct "ping" request/response is:
REQUEST
RESPONSE
The status of all services is tested hourly, and is recorded in the
LSID metadata for each service as a boolean value in the RDF tag
"isAlive", which may be used by client software to filter-out
non-functional services.
150.37.133.58
test_getKCFFromGlycanID
CDK.SF.NET
CalculateAccurateMass
ab.wur.nl
MetwareGetExperimentRaw
random_number
xcmsFindPeaks
arabidopsis.info
getArabidopsisImageByNASCinsertNumber
getArabidopsisImageByNASCstockCode
getNASCinsertByAGI
getNASCphenotypeByAGI
getNASCstockCodeByAGI
getNASCstockNameByAGI
arabidopsis.med.ohio-state.edu
getAGRISTFFamilyNameByAGI
arabidopsis.org
AGILocusList
Locus2CDNAFasta
Locus2CDSFasta
Locus2GeneAliases
Locus2GenomicFasta
Locus2GoIDs
Locus2PhenotypeDescriptions
Locus2ProteinFasta
Locus2Publications
Locus2SpliceVariants
Transcript2UniprotID
arexdb.org
getAREXGFPImageCollection
getGOCollection
asrp.cgrb.oregonstate.edu
ASRP_miRNA_target_in_AGI
ASRP_smallRNA_hit_in_IGR_downstream_of_AGI
ASRP_smallRNA_hit_in_IGR_upstream_of_AGI
ASRP_smallRNA_sequence_from_chromosomal_AGI
bar.utoronto.ca
getAGI_eFPImage
getAGI_SubCellLocalisationImage
bibiserv.techfak.uni-bielefeld.de
RNAShapes_ConsensusShapes
RNAShapes_Sampling
RNAShapes_ShapeFolding
RNAShapes_ShapeProbabilities
RNAShapes_SuboptimalShapeFolding
bioassist.nl
BioAssistSequenceSorter
bioinfo.cipf.es
buildPredictionModel
displayDifferentialExpressionTest
getGeneListFromDifferentialExpressionTest
getGeneListFromPredictionModel
getGeneWeightedListFromDifferentialExpressionTest
getPlotFromPredictionModel
runDifferentialExpressionTest
runFatiGO
runPreprocessing
splitGeneList
bioinfo.icapture.ubc.ca
convertIdentifier2KeggID
convertKeggGeneId2ProtId
convertUniProtId2PDBId
extractSequenceRecordsFromFasta
extractSequenceRecordsFromFastaIntoCollection
GeneticMap2GFF
getCddConservedProteinDomainIdsByLabel
getCogsConservedDomainIdsByGi
getCogsConservedDomainIdsByLocusLinkId
getCogsConservedProteinDomainIdsByLabel
getColoredKeggPathwayOfKeggIds
getGenBankFastaFromAcc
getGisByCogsConservedDomainId
getGisByPfamConservedDomainId
getGisBySmartConservedDomainId
getJpegFromAnnotatedImage
getKeggCompoundsOnKeggPathway
getKeggIdsByKeggPathway
getKeggPathwayAsGif
getKeggPathwaysByKeggID
getPfamConservedDomainIdsByGi
getPfamConservedDomainIdsByLocusLinkId
getPfamConservedProteinDomainIdsByLabel
getPubChemSubstanceIdByKeggCompound
getSdfForPubChemSubstance
getSmartConservedDomainIdsByGi
getSmartConservedDomainIdsByLocusLinkId
getSmartConservedProteinDomainIdsByLabel
getSnpsBySwissProtId
getUniprotDescriptorsByKeyword
getUniprotIdentifierByGeneName
getUniprotIdentifiersByKeyword
MOBYSHoundAllGenomesWithNumProteins
MOBYSHoundGiFromGOID
MOBYSHoundGiFromGOIDAndECode
MOBYSHoundGiFromGOIDList
MOBYSHoundGiFromGOIDListAndECode
MOBYSHoundGiFromLocusID
MOBYSHoundGiFromLocusIDList
MOBYSHoundGiFromOMIM
MOBYSHoundGiFromOMIMList
MOBYSHoundGODBGetAllAncestors
MOBYSHoundGODBGetAllChildren
MOBYSHoundGODBGetChildrenOf
MOBYSHoundGODBGetClassification
MOBYSHoundGODBGetNameByID
MOBYSHoundGODBGetParentOf
MOBYSHoundGODBGetRecordByReference
MOBYSHoundGOECodeFromGiAndGOID
MOBYSHoundGOIDFromGi
MOBYSHoundGOIDFromGiList
MOBYSHoundGOIDFromLocusID
MOBYSHoundGOIDFromRedundantGi
MOBYSHoundGOIDFromRedundantGiList
MOBYSHoundLocusIDFromGi
MOBYSHoundLocusIDFromGiList
MOBYSHoundLocusIDFromGOIDAndECode
MOBYSHoundLocusIDFromOMIM
MOBYSHoundPMIDFromGiAndGOID
bioinfo.mpimp-golm.mpg.de
getTrypticPeptideSequenceByAGI
bioinformatics.lan.ablynx.com
WelcomeProgram
biolit.ucsd.edu
BioLit
PDBID
PMID
biomoby.renci.org
Antigenic
BackTranAmbig
BackTranSeq
Banana
Biosed
Blast
Btwisted
Cai
Chaos
Charge
Checktrans
Chips
Clustalw
Codcmp
CompSeq
Cons
Consense
CPGPlot
CPGReport
Cusp
DeGapSeq
DescSeq
DiffSeq
Digest
DNAComp
DNADist
DNAPars
DNAPenny
DotMatcher
DotPath
Dottup
Drawgram
Drawtree
DReg
EInverted
Emowse
EQuickTandem
Est2Genome
ETandem
ExtractBlastReportSequences
ExtractFeat
ExtractSeq
Fitch
Freak
FuzzNuc
FuzzPro
FuzzTran
Garnier
Geecee
GetOrf
HelixTurnHelix
Iep
InfoAlign
IsNucleotideSequence
IsoChore
Kitsch
Listor
LookupSequence
MakeNucSeq
MakeProtSeq
MarScan
MaskFeat
Matcher
MegaMerger
Merger
MSBAR
Needle
Neighbor
NewCPGReport
NewCPGSeek
NotSeq
Octanol
OddComp
Palindrome
PatMatDB
PatMatMotifs
PepCoil
PepInfo
PepNet
PepStats
PepWheel
PepWindow
PepWindowAll
PlotCon
PlotOrf
PolyDot
PrettyPlot
PrettySeq
ProtDist
ProtPars
Recoder
RegisterAminoAcidSequence
RegisterNucleotideSequence
RegisterSequence
RevSeq
SeqMatchAll
SeqRetSplit
ShowAlign
ShowFeat
ShowOrf
ShowSeq
SigCleave
Splitter
Stretcher
SuperMatcher
Syco
TFScan
TranSeq
TrimEST
TrimSeq
Union
Water
Wobble
WordCount
WordMatch
castor.brc.mcw.edu
gbNucleotideFromRgd
gbProteinFromRgd
genbankToGene
keywordToGene
LLToRgdId
pmidFromRgd
rgdIdToGOID
spFromRgd
symbolFromRgd
ccgb.umn.edu
GI2ScientificName
ccrc.uga.edu
ccrctest
Glyde2svg
cgl.imim.es
getAAFromWeightedObject
getIDsFromBlast
getPDBIdsFromProteinID
getUniProtIdsFromProteinID
runBlastXP
chirimoyo.ac.uma.es
OTPrueba
cshl.edu
getArabidoposisAMIRNA
getArabidoposisAMIRNA2
demo.genomecenter.ucdavis.edu
clustalwmultialign
newicktopdf
quicktree
edu.purdue.discoverypark.ionomics
PiiMS_Test
eva.mpg.de
EvocGetDIGDescriptionFromID
EvocID2Name
EvocName2ID
EvocRealizeCDNA
EvocRetrieveCDNA
heaven.mshri.on.ca
GridService
husar.gpcf.dkfz.de
AnnotateSSAndNS_SNPs
CheckNMD
CheckPolyASignal
CheckTmSignalPChanges
RunSIFT
SNP_2_LocationInTranscript
iant.toulouse.inra.fr
AlignmentFilter
BlastToIds
BlastToList
BlastToLocus_tags
ENZYMEGetCodeFromProduct
ENZYMEGetCodeFromReaction
ENZYMEGetDescription
ENZYMEGetProductFromCode
ENZYMEGetReactionFromCode
iANTautoSNP
iANTFastaReformat
iANTFastaToXml
iANTPatScan
iANTPatScanFromXml
iANTSortEntries
iANTSortFeatures
iANTSputnik
iANTSputnikFromXml
iANTXmlToAccessions
iANT_entryToFasta
iANT_filter
iANT_seg
iANT_tmpred
inb.bsc.es
HelloWorld
inblosam.com
extractGeneProteinNames
itdinges.mine.nu
Echo
helloWorld
lipm-bioinfo.toulouse.inra.fr
AceToFasta
ClustalWFastaCollection
ClustalWMultiFasta
EMBOSSbacktranseq
EMBOSScai
EMBOSScharge
EMBOSSchecktrans
EMBOSSchips
EMBOSScodcmp
EMBOSScompseq
EMBOSScusp
EMBOSSdigest
EMBOSSeinverted
EMBOSSemowse
EMBOSSequicktandem
EMBOSSetandem
EMBOSSfreak
EMBOSSgarnier
EMBOSSgetorf
EMBOSShelixturnhelix
EMBOSShmoment
EMBOSSiep
EMBOSSinfoalign
EMBOSSmarscan
EMBOSSoctanol
EMBOSSoddcomp
EMBOSSpalindrome
EMBOSSpepcoil
EMBOSSpepinfo
EMBOSSpepnet
EMBOSSpepstats
EMBOSSpepwheel
EMBOSSpepwindow
EMBOSSplotorf
EMBOSSprettyplot
EMBOSSprettyseq
EMBOSSsigcleave
EMBOSStmap
EMBOSS_transeq
EMBOSS_vectorstrip
EMBOSS_water
FASTAToalignment_in_fasta_format
FASTAToFASTA_AA
FASTAToFASTA_AA_multi
FASTAToFASTA_NA
FASTAToFASTA_NA_multi
FASTA_AA_multiToFASTA_AACollection
FASTA_NA_multiToFASTA_NACollection
iANT_entry_dbToiANT_entryCollection
ListSplitter
ListToObjectCollection
ListToStringCollection
MemeNucleic
MemeProteic
MergeFastaSequences
MsfToFasta
MsfToPhylip
MsfToPsiblast
newicktopdf
ObjectCollectionToList
ObjectCollectionToStringCollection
PsiBlastFromAlignment
RMES
RMES_FORMAT
SeqLogo
StringToList_Text
llama.med.harvard.edu
CCSBHI1
CorrelatedCoexpression
GavinSpoke
Giot
Harbison
Ito2001
Johnson
LCI
LeeTF
Phosphorylome
Shyamsundar
Stelzl
Su
Tong2004
Uetz
Zhang
metnetdb.org
getMetNetComments
getMetNetPathways
migale.jouy.inra.fr
Water
mips.gsf.de
getAllGeneticElements
getAramemnonRefsByAgi
getClonesByFreeText
getClonesByName
getClonesForChromosome
getContigsByFreeText
getContigsByName
getElement
getElementAnnotation
getElementsByFreeText
getElementsByName
getElementsForContig
getElementsOfType
getGeneticElementsOfType
getMIPSArabidopsisAnnotationAsGFF3
getProteinSequence
getSplicedSequence
getTairRefsByAgi
getTmhmmPrediction
getUnsplicedSequence
mncn.csic.es
getCoordinatesOfTaxon
moby.ucalgary.ca
ABIChromatogramToDNASequence
RemoveSequenceRegion
ReverseComplementSequence
runNCBIBlastn
runNCBIBlastp
runNCBIBlastx
runNCBITblastn
TrimSequenceEndsOfAmbiguities
TrimSequencePolyATail
TrimSequenceVector
mpiz-koeln.mpg.de
DummyTest
GO_Test
RunSifter_NewVersion
nugo-r.bioinformatics.nl
AffyArrayNormalization
AffyArrayNormalization_poll
AffyArrayNormalization_submit
AffyArrayQualityAnalysis
AffyArrayQualityAnalysis_poll
AffyArrayQualityAnalysis_submit
plantenergy.uwa.edu.au
SUBA_AGI2CallLocation
SUBA_AGI2PredLocation
SUBA_AGI2Publications
SUBA_CallLocation2AGI
SUBA_Location2Publications
SUBA_PredLocation2AGI
plantgdb.org
VMatchForArabidopsis
rings.t.soka.ac.jp
getGlycanByCompositionFromCFG
getGlycanByCompositionFromEuroCarb
getGlycanByIDFromCFG
getGlycanByIDFromEuroCarb
getGlycanByLogicOperationFromCFG
getGlycanByLogicOperationFromEuroCarb
getGlycanByMassFromCFG
getGlycanByMassFromEuroCarb
getGlycanBySubstructureFromCFG
getGlycanBySubstructureFromEuroCarb
getGlycanFromCFG
getGlycanFromCFG_ID
getKCFFromGlycanID
getKCFfromIUPAC
getKCFFromLINUCS
getLINUCSFromKCF
getListIDfromGlycan
getSimilarGlycans
getSimilarGlycansWithScore
getSimilarGlycansWithScoreFromKCF
RINGSBlast
RINGStest
RINGStest2
sapporo.genomics.purdue.edu
FeatureScan
LexiSearch
PlantspBlast
schematikon.org
PDBtoMotifID
PDBtoSegmentID
RetrieveMotifNeighbours
RetrieveMotifSupport
RetrieveMotifVoronoiNeighbours
RetrieveSegmentAttributes
RetrieveStructureAnnotation
RetrieveStructureSegmentAminoAcidSequence
scri.ac.uk
ConvertAAtoFASTA_AA
seedgenes.org
SeedGenesEmbryoImageCollectionByAgiCode
sgn.cornell.edu
GetSGNUnigene
GetSGNUnigeneConsensusSequence
sirius.brc.mcw.edu
genbankToGene
soaplab.icapture.ubc.ca
seqretDNARAW2FASTA
seqretDNARefFASTA2IG
seqretPROTEINRefMEGA2FASTA
seqretPROTEINSWISS2FASTA
ssg.uab.edu
getAffyProbesetIdsForAgiLocusCode
getAgiLocusCodesForAffyATH1ProbesetId
getGeneExpressionDataForNASCExperimentID
getKolmogrovQualityControlStatisticForSlidesInNASCExperimentId
test.lipm-bioinfo.toulouse.inra.fr
TabulatedToFasta
test.narcisse.toulouse.inra.fr
testPrimerDesign
testing.bioinfo.genopole-toulouse.prd.fr
ConvertTIGRXML2GFF3
tropgenedb.cirad.fr
test
test
ualberta.ca
BacMapBlastSearch
BacMapGetChromosomeSequence
BacMapGetGenBankRecord
BacMapGetGeneCard
BacMapGetProteinEncodingGeneSequences
BacMapGetProteinSequences
BacMapGetProteinTable
BacMapGetRNAEncodingGeneSequences
BacMapGetSpeciesCard
BacMapHtmlMap
BacMapHtmlStats
BacMapPNGMap
BacMapTextSearch
DrugBankByCardAsHtml
DrugBankByCardAsText
DrugBankByName
DrugBankBySequence
EColi_Blastp
getColiCardIDs_By_GenePosition
getColiCard_by_ColiCardID
getMetaboCardIDs_by_CAS_id
getMetaboCardIDs_by_Cellular_Location
getMetaboCardIDs_by_ChemicalFormula
getMetaboCardIDs_by_ChemicalName
getMetaboCardIDs_by_CommonName
getMetaboCardIDs_by_MeltingPoint
getMetaboCardIDs_by_MolecularWeight
getMetaboCardIDs_by_Pathway
getMetaboCardIDs_by_SMILES_String
getMetaboCard_by_MetaboCardID
getRNACardIDs_by_Blattner_number
getRNACardIDs_by_Calculated_MolecularWeight
getRNACardIDs_by_Cell_Location
getRNACardIDs_by_EC_number
getRNACardIDs_by_GenbankID
getRNACardIDs_By_GenePosition
getRNACardIDs_by_GeneralFunction
getRNACardIDs_by_InteractingPartners
getRNACardIDs_by_NucleotideLength
getRNACardIDs_by_QuaternaryStructure
getRNACardIDs_by_ReactionProducts
getRNACardIDs_by_ReactionSubstrates
getRNACardIDs_by_SpecificReaction
getRNACardIDs_by_SwissProtAcc
getRNACard_by_RNACardID
HMDBByCardAsText
HMDBSequenceSearch
PlasMapperDrawVectorMap
PlasMapperGenbankOutput
PlasMapperTextMap
Proteus
ShiftPredictionByPDBfile
ShiftPredictionByPDBid
ShiftPredictionByProteinSequence
urgi.versailles.inra.fr
PhytoprotGetByAGICode
PhytoprotGetByAminoAcidSequence
PhytoprotGetByClusterID
PhytoprotGetByKeyword
PhytoprotGetPyramid
PhytoprotGetXDom
vbd.crop.org.cn
getFASTArice
webservices.genouest.org
WelcomeProgram
workflow.renci.unc.edu
Blastn
convertIdentifier2KeggID
RegisterAminoAcidSequence
RegisterNucleotideSequence
RegisterSequence
www.ab.wur.nl
abwur_test_echo
abwur_test_xcms
www.bcgsc.bc.ca
getAvailableBioinformaticsProgramsFromChinook
www.bioinformatica.ucb.br
FastaConsensiFromGroup
getClusterGroups
getLibraries
getLibrariesFromGroup
getPlatesFromLibrary
getReadsFromPlate
www.bioinformatics.nl
MobyBlast_retrieve
www.cnio.es
PupaSNP
runDecypherBlastn
runDecypherBlastp
runDecypherBlastx
www.cs.purdue.edu
SQL
www.dkfz.de
concatenateStrings
makeStringId
www.ebi.ac.uk
dbfetch_getEmbl
dbfetch_getFasta
www.gbif.org
GBIFGetDetailedOccurrenceRecord
GBIFGetTaxonOccurrences
GBIFGetTaxonTCS
www.generationcp.org
getCoordinatesOfTaxon
www.glyco.is.ritsumei.ac.jp
getGlycoEpitopeIDfromKeyword
getIUPACfromGlycoEpitopeID
www.glycome-db.org
getAglyconByCarbohydrate
getAllCarbohydrateID
getCarbohydratePng
getCarbohydrateSequence
getCarbohydrateSequenceByList
getCarbohydrateSequenceByXML
getCarbohydrateSvg
getGlycomeIdByCarbohydrate
getGlycomeIDExpiredEntry
getGlycomeIDReport
getGlydeIIByID
getRemoteEntriesByAglycon
getRemoteEntriesByCarbohydrate
getRemoteEntriesByTaxon
getTaxonByCarbohydrate
searchGlycomeDB
translateCarbohydrateSequence
translateSequence
www.heliagene.org
HeliageneGetAce
HeliageneGetEntry
HeliageneGetFrameD
HeliageneGetSequence
www.helsinki.gr
PTPInfo
www.hgvbase.org
getAssayMethodList
getAssayTypeList
getCategoryNameList
getCompositionTypeList
getDiseaseAreaNameList
getExperimentTypeList
getGenotypedefTypeList
getOligoRoleList
getSamplepanelSourceOfDNAList
www.icris.icrisat.org
getCropNames
www.iris.irri.org
getAccessionByGermplasm
getDataset
getGermplasmAcquisitionDate
getGermplasmBiologicalStatus
getGermplasmByAccession
getGermplasmByName
getGermplasmByNameCount
getGermplasmByPhenotype
getGermplasmByPhenotypeCount
getGermplasmByTrait
getGermplasmDetails
getGermplasmIntelectualProperty
getOntologyTermByName
getOntologyTermDetails
getOntologyTermsById
getPhenotypesByGermplasm
getStudies
www.legoo.org
AmpliconsFormatConverter
www.ncbi.nlm.nih.gov
getEntrezGeneFromGI
getlitinfofromentrezgene
getPubMedIDFromGI
gi2ec
gi2ECNum
gi2entrezgene
GItoarticletitle
www.nias.affrc.go.jp
getExpressionRatioByProbe
getGeneByGO
getGeneExpressionByReporter
getGeneInfoKOME
getGeneProductByOntologyTerm
getMutantLineByPhenotypeId
getProbeByGene
getProbeExpressionData
getReportersOfTranscript
getTranscriptsByOntologyTerm
getTUImage
Tu_Blast
www.rcsb.org
getEntryFromPDB
www.rri.sari.ac.uk
TestExtractFetcher
www.sdsc.edu
plantspGetDNA
plantspGetProtein
plantspGetRNA
plantspMEME
SequenceToFASTA
www.tigr.org
getAthImageByAGI
getReporterImageByAGI
getReporterImageByAGI_dev
www.weigelworld.org
ATH_Deletion_Prediction
ATH_SNP_Coding
ATH_SNP_Range
MapSequence
xml.nig.ac.jp
countBasePairs
getAllDDBJFeaturesByAccession
getChIDList
getDDBJEntriesByScientificName
GetDDBJEntry
getDDBJFeatureInfo
getDDBJRelatedFeaturesByLocation
getDDBJxmlEntry
getFASTA_DDBJEntry
getFlatFileEntryByAccession